J3_7AC7_023

3D structure

PDB id

7AC7 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of accomodated trans-translation complex on E. Coli stalled ribosome.

Experimental method

ELECTRON MICROSCOPY

Resolution

3.08 Å

Loop

Sequence

UG*UGUUG*CGCAA

Length

12 nucleotides

Bulged bases

7AC7|1|2|A|1101

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

J3_7AC7_023 not in the Motif Atlas

Homologous match to J3_5J7L_009

Geometric discrepancy: 0.1437

The information below is about J3_5J7L_009

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

J3_76043.3

Basepair signature

cWW-cWW-tSS-F-F-F-F-cWW

Number of instances in this motif group

3

Unit IDs

7AC7|1|2|U|1073
7AC7|1|2|G|1074
*
7AC7|1|2|U|1083
7AC7|1|2|G|1084
7AC7|1|2|U|1085
7AC7|1|2|U|1086
7AC7|1|2|G|1087
*
7AC7|1|2|C|1098
7AC7|1|2|G|1099
7AC7|1|2|C|1100
7AC7|1|2|A|1101
7AC7|1|2|A|1102

Current chains

Chain 2

16S ribosomal RNA

Nearby chains

Chain g

30S ribosomal protein S2

Chain j

30S ribosomal protein S5

Chain z

30S ribosomal protein S21