3D structure

PDB id
7ACJ (explore in PDB, NAKB, or RNA 3D Hub)
Description
Structure of translocated trans-translation complex on E. coli stalled ribosome.
Experimental method
ELECTRON MICROSCOPY
Resolution
3.2 Å

Loop

Sequence
CUAAU*AGGUUAG*CAUAAG
Length
18 nucleotides
Bulged bases
7ACJ|1|1|U|2334
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

7ACJ|1|1|C|2295
7ACJ|1|1|U|2296
7ACJ|1|1|A|2297
7ACJ|1|1|A|2298
7ACJ|1|1|U|2299
*
7ACJ|1|1|A|2317
7ACJ|1|1|G|2318
7ACJ|1|1|G|2319
7ACJ|1|1|U|2320
7ACJ|1|1|U|2321
7ACJ|1|1|A|2322
7ACJ|1|1|G|2323
*
7ACJ|1|1|C|2332
7ACJ|1|1|A|2333
7ACJ|1|1|U|2334
7ACJ|1|1|A|2335
7ACJ|1|1|A|2336
7ACJ|1|1|G|2337

Current chains

Chain 1
23S ribosomal RNA

Nearby chains

Chain 3
5S ribosomal RNA; 5S rRNA
Chain 4
Transfer-messenger RNA; tmRNA
Chain A
50S ribosomal protein L27
Chain E
50S ribosomal protein L5
Chain O
50S ribosomal protein L18

Coloring options:

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