J3_7ACJ_024

3D structure

PDB id

7ACJ (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of translocated trans-translation complex on E. coli stalled ribosome.

Experimental method

ELECTRON MICROSCOPY

Resolution

3.2 Å

Loop

Sequence

CAAUG*CGUAGUCCGGAUU*AUGAAGUCG

Length

27 nucleotides

Bulged bases

7ACJ|1|2|U|1240, 7ACJ|1|2|G|1300

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7ACJ|1|2|C|1237
7ACJ|1|2|A|1238
7ACJ|1|2|A|1239
7ACJ|1|2|U|1240
7ACJ|1|2|G|1241
*
7ACJ|1|2|C|1296
7ACJ|1|2|G|1297
7ACJ|1|2|U|1298
7ACJ|1|2|A|1299
7ACJ|1|2|G|1300
7ACJ|1|2|U|1301
7ACJ|1|2|C|1302
7ACJ|1|2|C|1303
7ACJ|1|2|G|1304
7ACJ|1|2|G|1305
7ACJ|1|2|A|1306
7ACJ|1|2|U|1307
7ACJ|1|2|U|1308
*
7ACJ|1|2|A|1329
7ACJ|1|2|U|1330
7ACJ|1|2|G|1331
7ACJ|1|2|A|1332
7ACJ|1|2|A|1333
7ACJ|1|2|G|1334
7ACJ|1|2|U|1335
7ACJ|1|2|C|1336
7ACJ|1|2|G|1337

Current chains

Chain 2

16S ribosomal RNA

Nearby chains

Chain l

30S ribosomal protein S7

Chain r

30S ribosomal protein S13