3D structure

PDB id
7ACJ (explore in PDB, NAKB, or RNA 3D Hub)
Description
Structure of translocated trans-translation complex on E. coli stalled ribosome.
Experimental method
ELECTRON MICROSCOPY
Resolution
3.2 Å

Loop

Sequence
CAAUG*CGUAGUCCGGAUU*AUGAAGUCG
Length
27 nucleotides
Bulged bases
7ACJ|1|2|U|1240, 7ACJ|1|2|G|1300
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

7ACJ|1|2|C|1237
7ACJ|1|2|A|1238
7ACJ|1|2|A|1239
7ACJ|1|2|U|1240
7ACJ|1|2|G|1241
*
7ACJ|1|2|C|1296
7ACJ|1|2|G|1297
7ACJ|1|2|U|1298
7ACJ|1|2|A|1299
7ACJ|1|2|G|1300
7ACJ|1|2|U|1301
7ACJ|1|2|C|1302
7ACJ|1|2|C|1303
7ACJ|1|2|G|1304
7ACJ|1|2|G|1305
7ACJ|1|2|A|1306
7ACJ|1|2|U|1307
7ACJ|1|2|U|1308
*
7ACJ|1|2|A|1329
7ACJ|1|2|U|1330
7ACJ|1|2|G|1331
7ACJ|1|2|A|1332
7ACJ|1|2|A|1333
7ACJ|1|2|G|1334
7ACJ|1|2|U|1335
7ACJ|1|2|C|1336
7ACJ|1|2|G|1337

Current chains

Chain 2
16S ribosomal RNA

Nearby chains

Chain l
30S ribosomal protein S7
Chain r
30S ribosomal protein S13

Coloring options:

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