J3_7ACJ_031

3D structure

PDB id

7ACJ (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of translocated trans-translation complex on E. coli stalled ribosome.

Experimental method

ELECTRON MICROSCOPY

Resolution

3.2 Å

Loop

Sequence

GCACAAGC*GCUAGUAA*UGAAUACGUUCCC

Length

29 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7ACJ|1|2|G|933
7ACJ|1|2|C|934
7ACJ|1|2|A|935
7ACJ|1|2|C|936
7ACJ|1|2|A|937
7ACJ|1|2|A|938
7ACJ|1|2|G|939
7ACJ|1|2|C|940
*
7ACJ|1|2|G|1343
7ACJ|1|2|C|1344
7ACJ|1|2|U|1345
7ACJ|1|2|A|1346
7ACJ|1|2|G|1347
7ACJ|1|2|U|1348
7ACJ|1|2|A|1349
7ACJ|1|2|A|1350
*
7ACJ|1|2|U|1372
7ACJ|1|2|G|1373
7ACJ|1|2|A|1374
7ACJ|1|2|A|1375
7ACJ|1|2|U|1376
7ACJ|1|2|A|1377
7ACJ|1|2|C|1378
7ACJ|1|2|G|1379
7ACJ|1|2|U|1380
7ACJ|1|2|U|1381
7ACJ|1|2|C|1382
7ACJ|1|2|C|1383
7ACJ|1|2|C|1384

Current chains

Chain 2

16S ribosomal RNA

Nearby chains

Chain 5

SsrA-binding protein

Chain l

30S ribosomal protein S7

Chain n

30S ribosomal protein S9