J3_7ACJ_032

3D structure

PDB id

7ACJ (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of translocated trans-translation complex on E. coli stalled ribosome.

Experimental method

ELECTRON MICROSCOPY

Resolution

3.2 Å

Loop

Sequence

GGUGGAGCAU*GUGCUAC*GGAAUC

Length

23 nucleotides

Bulged bases

7ACJ|1|2|G|1338

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7ACJ|1|2|G|941
7ACJ|1|2|G|942
7ACJ|1|2|U|943
7ACJ|1|2|G|944
7ACJ|1|2|G|945
7ACJ|1|2|A|946
7ACJ|1|2|G|947
7ACJ|1|2|C|948
7ACJ|1|2|A|949
7ACJ|1|2|U|950
*
7ACJ|1|2|G|1231
7ACJ|1|2|U|1232
7ACJ|1|2|G|1233
7ACJ|1|2|C|1234
7ACJ|1|2|U|1235
7ACJ|1|2|A|1236
7ACJ|1|2|C|1237
*
7ACJ|1|2|G|1337
7ACJ|1|2|G|1338
7ACJ|1|2|A|1339
7ACJ|1|2|A|1340
7ACJ|1|2|U|1341
7ACJ|1|2|C|1342

Current chains

Chain 2

16S ribosomal RNA

Nearby chains

Chain 5

SsrA-binding protein

Chain l

30S ribosomal protein S7

Chain n

30S ribosomal protein S9

Chain r

30S ribosomal protein S13