J3_7ACR_025

3D structure

PDB id

7ACR (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of post-translocated trans-translation complex on E. coli stalled ribosome.

Experimental method

ELECTRON MICROSCOPY

Resolution

3.44 Å

Loop

Sequence

CAAUG*CGUAGUCC*GUCG

Length

17 nucleotides

Bulged bases

7ACR|1|2|U|1240, 7ACR|1|2|C|1302

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

J3_7ACR_025 not in the Motif Atlas

Homologous match to J3_4LFB_009

Geometric discrepancy: 0.2642

The information below is about J3_4LFB_009

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

J3_03192.1

Basepair signature

cWW-cSS-tHW-F-F-F-cWW-cWW-cSH-cSH-F

Number of instances in this motif group

5

Unit IDs

7ACR|1|2|C|1237
7ACR|1|2|A|1238
7ACR|1|2|A|1239
7ACR|1|2|U|1240
7ACR|1|2|G|1241
*
7ACR|1|2|C|1296
7ACR|1|2|G|1297
7ACR|1|2|U|1298
7ACR|1|2|A|1299
7ACR|1|2|G|1300
7ACR|1|2|U|1301
7ACR|1|2|C|1302
7ACR|1|2|C|1303
*
7ACR|1|2|G|1334
7ACR|1|2|U|1335
7ACR|1|2|C|1336
7ACR|1|2|G|1337

Current chains

Chain 2

16S ribosomal RNA

Nearby chains

Chain l

30S ribosomal protein S7

Chain r

30S ribosomal protein S13