J3_7AFN_004

3D structure

PDB id

7AFN (explore in PDB, NAKB, or RNA 3D Hub)

Description

Bacterial 30S ribosomal subunit assembly complex state B (head domain)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.86 Å

Loop

Sequence

GAAG*UGUGC*GAAC

Length

13 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7AFN|1|1|G|1003
7AFN|1|1|A|1004
7AFN|1|1|A|1005
7AFN|1|1|G|1006
*
7AFN|1|1|U|1023
7AFN|1|1|G|1024
7AFN|1|1|U|1025
7AFN|1|1|G|1026
7AFN|1|1|C|1027
*
7AFN|1|1|G|1034
7AFN|1|1|A|1035
7AFN|1|1|A|1036
7AFN|1|1|C|1037

Current chains

Chain 1

16SrRNA (head domain of the 30S ribosome)

Nearby chains

Chain N

30S ribosomal protein S14