J3_7AS8_007

3D structure

PDB id

7AS8 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Bacillus subtilis ribosome quality control complex state B. Ribosomal 50S subunit with P-tRNA, RqcH, and RqcP/YabO

Experimental method

ELECTRON MICROSCOPY

Resolution

2.9 Å

Loop

Sequence

CGAAUG*CGA*UAAG

Length

13 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

J3_7AS8_007 not in the Motif Atlas

Homologous match to J3_7A0S_006

Geometric discrepancy: 0.1492

The information below is about J3_7A0S_006

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

J3_32852.6

Basepair signature

cWW-tSH-F-F-F-cWW-cWW-F

Number of instances in this motif group

5

Unit IDs

7AS8|1|A|C|1337
7AS8|1|A|G|1338
7AS8|1|A|A|1339
7AS8|1|A|A|1340
7AS8|1|A|U|1341
7AS8|1|A|G|1342
*
7AS8|1|A|C|1670
7AS8|1|A|G|1671
7AS8|1|A|A|1672
*
7AS8|1|A|U|1684
7AS8|1|A|A|1685
7AS8|1|A|A|1686
7AS8|1|A|G|1687

Current chains

Chain A

23S rRNA

Nearby chains