J3_7AS8_017
3D structure
- PDB id
- 7AS8 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Bacillus subtilis ribosome quality control complex state B. Ribosomal 50S subunit with P-tRNA, RqcH, and RqcP/YabO
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.9 Å
Loop
- Sequence
- UGAAG*CGCCAUAGGA*UGUAG
- Length
- 20 nucleotides
- Bulged bases
- 7AS8|1|A|U|365
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- J3_7AS8_017 not in the Motif Atlas
- Homologous match to J3_4WF9_015
- Geometric discrepancy: 0.1156
- The information below is about J3_4WF9_015
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- J3_46299.2
- Basepair signature
- cWW-F-F-F-cHH-cWW-tHS-F-cWW-cSW-tHS-cWW
- Number of instances in this motif group
- 3
Unit IDs
7AS8|1|A|U|340
7AS8|1|A|G|341
7AS8|1|A|A|342
7AS8|1|A|A|343
7AS8|1|A|G|344
*
7AS8|1|A|C|360
7AS8|1|A|G|361
7AS8|1|A|C|362
7AS8|1|A|C|363
7AS8|1|A|A|364
7AS8|1|A|U|365
7AS8|1|A|A|366
7AS8|1|A|G|367
7AS8|1|A|G|368
7AS8|1|A|A|369
*
7AS8|1|A|U|381
7AS8|1|A|G|382
7AS8|1|A|U|383
7AS8|1|A|A|384
7AS8|1|A|G|385
Current chains
- Chain A
- 23S rRNA
Nearby chains
- Chain G
- 50S ribosomal protein L4
- Chain Y
- 50S ribosomal protein L24
Coloring options: