J3_7ASN_003

3D structure

PDB id

7ASN (explore in PDB, NAKB, or RNA 3D Hub)

Description

Staphylococcus aureus 50S after 30 minutes incubation a 37C

Experimental method

ELECTRON MICROSCOPY

Resolution

2.73 Å

Loop

Sequence

UGAUCUA*UAG*CGAA

Length

14 nucleotides

Bulged bases

7ASN|1|A|U|731, 7ASN|1|A|G|837, 7ASN|1|A|A|838

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

J3_7ASN_003 not in the Motif Atlas

Homologous match to J3_5J7L_038

Geometric discrepancy: 0.105

The information below is about J3_5J7L_038

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

J3_64189.2

Basepair signature

cWW-tWH-cWW-tSW-F-F-cWW

Number of instances in this motif group

7

Unit IDs

7ASN|1|A|U|728
7ASN|1|A|G|729
7ASN|1|A|A|730
7ASN|1|A|U|731
7ASN|1|A|C|732
7ASN|1|A|U|733
7ASN|1|A|A|734
*
7ASN|1|A|U|818
7ASN|1|A|A|819
7ASN|1|A|G|820
*
7ASN|1|A|C|836
7ASN|1|A|G|837
7ASN|1|A|A|838
7ASN|1|A|A|839

Current chains

Chain A

23S

Nearby chains

Chain 2

50S ribosomal protein L34

Chain F

50S ribosomal protein L2