J3_7ASO_007
3D structure
- PDB id
- 7ASO (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Staphylococcus aureus 70S after 30 minutes incubation at 37C
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.11 Å
Loop
- Sequence
- ACGUUACUAACG*UGC*GAUUU
- Length
- 20 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- J3_7ASO_007 not in the Motif Atlas
- Geometric match to J3_4WF9_001
- Geometric discrepancy: 0.2632
- The information below is about J3_4WF9_001
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- J3_47707.1
- Basepair signature
- cWW-F-F-F-F-F-cWW-F-cWW-F-F-cSH-cSH-cWW-F
- Number of instances in this motif group
- 1
Unit IDs
7ASO|1|Y|A|56
7ASO|1|Y|C|57
7ASO|1|Y|G|58
7ASO|1|Y|U|59
7ASO|1|Y|U|60
7ASO|1|Y|A|61
7ASO|1|Y|C|62
7ASO|1|Y|U|63
7ASO|1|Y|A|64
7ASO|1|Y|A|65
7ASO|1|Y|C|66
7ASO|1|Y|G|67
*
7ASO|1|Y|U|74
7ASO|1|Y|G|75
7ASO|1|Y|C|76
*
7ASO|1|Y|G|109
7ASO|1|Y|A|110
7ASO|1|Y|U|111
7ASO|1|Y|U|112
7ASO|1|Y|U|113
Current chains
- Chain Y
- 23S
Nearby chains
- Chain W
- 50S ribosomal protein L23
- Chain d
- 50S ribosomal protein L29
- Chain i
- 50S ribosomal protein L34
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