J3_7ASO_012
3D structure
- PDB id
- 7ASO (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Staphylococcus aureus 70S after 30 minutes incubation at 37C
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.11 Å
Loop
- Sequence
- UAAG*CGCAAAC*GUA
- Length
- 14 nucleotides
- Bulged bases
- 7ASO|1|Y|A|1653
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- J3_7ASO_012 not in the Motif Atlas
- Homologous match to J3_7RQB_008
- Geometric discrepancy: 0.2207
- The information below is about J3_7RQB_008
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- J3_16623.1
- Basepair signature
- cWW-tSH-tWW-tHH-F-tHW-cWW-F-cWW
- Number of instances in this motif group
- 2
Unit IDs
7ASO|1|Y|U|1343
7ASO|1|Y|A|1344
7ASO|1|Y|A|1345
7ASO|1|Y|G|1346
*
7ASO|1|Y|C|1649
7ASO|1|Y|G|1650
7ASO|1|Y|C|1651
7ASO|1|Y|A|1652
7ASO|1|Y|A|1653
7ASO|1|Y|A|1654
7ASO|1|Y|C|1655
*
7ASO|1|Y|G|1664
7ASO|1|Y|U|1665
7ASO|1|Y|A|1666
Current chains
- Chain Y
- 23S
Nearby chains
- Chain i
- 50S ribosomal protein L34
Coloring options: