3D structure

PDB id
7ASO (explore in PDB, NAKB, or RNA 3D Hub)
Description
Staphylococcus aureus 70S after 30 minutes incubation at 37C
Experimental method
ELECTRON MICROSCOPY
Resolution
3.11 Å

Loop

Sequence
CGGGGACCCGCACAAGC*GCUAGUAAUCGUA*UACGGUGAAUACGUUCCCGGGUCUUG
Length
56 nucleotides
Bulged bases
7ASO|1|X|G|936, 7ASO|1|X|C|1389, 7ASO|1|X|U|1392, 7ASO|1|X|C|1393, 7ASO|1|X|C|1395
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

7ASO|1|X|C|934
7ASO|1|X|G|935
7ASO|1|X|G|936
7ASO|1|X|G|937
7ASO|1|X|G|938
7ASO|1|X|A|939
7ASO|1|X|C|940
7ASO|1|X|C|941
7ASO|1|X|C|942
7ASO|1|X|G|943
7ASO|1|X|C|944
7ASO|1|X|A|945
7ASO|1|X|C|946
7ASO|1|X|A|947
7ASO|1|X|A|948
7ASO|1|X|G|949
7ASO|1|X|C|950
*
7ASO|1|X|G|1354
7ASO|1|X|C|1355
7ASO|1|X|U|1356
7ASO|1|X|A|1357
7ASO|1|X|G|1358
7ASO|1|X|U|1359
7ASO|1|X|A|1360
7ASO|1|X|A|1361
7ASO|1|X|U|1362
7ASO|1|X|C|1363
7ASO|1|X|G|1364
7ASO|1|X|U|1365
7ASO|1|X|A|1366
*
7ASO|1|X|U|1378
7ASO|1|X|A|1379
7ASO|1|X|C|1380
7ASO|1|X|G|1381
7ASO|1|X|G|1382
7ASO|1|X|U|1383
7ASO|1|X|G|1384
7ASO|1|X|A|1385
7ASO|1|X|A|1386
7ASO|1|X|U|1387
7ASO|1|X|A|1388
7ASO|1|X|C|1389
7ASO|1|X|G|1390
7ASO|1|X|U|1391
7ASO|1|X|U|1392
7ASO|1|X|C|1393
7ASO|1|X|C|1394
7ASO|1|X|C|1395
7ASO|1|X|G|1396
7ASO|1|X|G|1397
7ASO|1|X|G|1398
7ASO|1|X|U|1399
7ASO|1|X|C|1400
7ASO|1|X|U|1401
7ASO|1|X|U|1402
7ASO|1|X|G|1403

Current chains

Chain X
16S

Nearby chains

Chain 1
30S ribosomal protein S10
Chain 5
30S ribosomal protein S14 type Z
Chain D
30S ribosomal protein S5
Chain G
30S ribosomal protein S7
Chain H
30S ribosomal protein S9

Coloring options:

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