Loop J3_7ASO

3D structure

PDB id: 7ASO (explore in PDB, NAKB, or RNA 3D Hub)
Description: Staphylococcus aureus 70S after 30 minutes incubation at 37C
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.11 Å

Loop

Sequence: GUGGUGCAUGGUUGUCGUCAG*CGCAACCCU*GGGAUGACGUCAAAUCAUCAUGCCC
Length: 55 nucleotides
Bulged bases: 7ASO|1|X|G|1063, 7ASO|1|X|C|1066, 7ASO|1|X|U|1071, 7ASO|1|X|A|1202, 7ASO|1|X|U|1213, 7ASO|1|X|C|1214
QA status: Valid loop

Sequence variability

R3DSVS

Structural variability across Equivalence Class

R3DMCS EC

Structural variability across Rfam

R3DMCS Rfam

Detailed Annotation: No text annotation
Broad Annotation: No text annotation
Motif group: Not in a motif group
Basepair signature: Not available
Number of instances in this motif group: 0

Unit IDs

7ASO|1|X|G|1060
7ASO|1|X|U|1061
7ASO|1|X|G|1062
7ASO|1|X|G|1063
7ASO|1|X|U|1064
7ASO|1|X|G|1065
7ASO|1|X|C|1066
7ASO|1|X|A|1067
7ASO|1|X|U|1068
7ASO|1|X|G|1069
7ASO|1|X|G|1070
7ASO|1|X|U|1071
7ASO|1|X|U|1072
7ASO|1|X|G|1073
7ASO|1|X|U|1074
7ASO|1|X|C|1075
7ASO|1|X|G|1076
7ASO|1|X|U|1077
7ASO|1|X|C|1078
7ASO|1|X|A|1079
7ASO|1|X|G|1080
*
7ASO|1|X|C|1119
7ASO|1|X|G|1120
7ASO|1|X|C|1121
7ASO|1|X|A|1122
7ASO|1|X|A|1123
7ASO|1|X|C|1124
7ASO|1|X|C|1125
7ASO|1|X|C|1126
7ASO|1|X|U|1127
*
7ASO|1|X|G|1196
7ASO|1|X|G|1197
7ASO|1|X|G|1198
7ASO|1|X|A|1199
7ASO|1|X|U|1200
7ASO|1|X|G|1201
7ASO|1|X|A|1202
7ASO|1|X|C|1203
7ASO|1|X|G|1204
7ASO|1|X|U|1205
7ASO|1|X|C|1206
7ASO|1|X|A|1207
7ASO|1|X|A|1208
7ASO|1|X|A|1209
7ASO|1|X|U|1210
7ASO|1|X|C|1211
7ASO|1|X|A|1212
7ASO|1|X|U|1213
7ASO|1|X|C|1214
7ASO|1|X|A|1215
7ASO|1|X|U|1216
7ASO|1|X|G|1217
7ASO|1|X|C|1218
7ASO|1|X|C|1219
7ASO|1|X|C|1220

Current chains

Chain X: 16S

Nearby chains

Chain 1: 30S ribosomal protein S10
Chain 5: 30S ribosomal protein S14 type Z
Chain B: 30S ribosomal protein S3
Chain D: 30S ribosomal protein S5
Chain H: 30S ribosomal protein S9

J3_7ASO_022