J3_7ASO_035

3D structure

PDB id

7ASO (explore in PDB, NAKB, or RNA 3D Hub)

Description

Staphylococcus aureus 70S after 30 minutes incubation at 37C

Experimental method

ELECTRON MICROSCOPY

Resolution

3.11 Å

Loop

Sequence

GCUAA*UGCAG*CAUUAAGC

Length

18 nucleotides

Bulged bases

7ASO|1|X|U|880, 7ASO|1|X|U|881, 7ASO|1|X|A|883

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7ASO|1|X|G|833
7ASO|1|X|C|834
7ASO|1|X|U|835
7ASO|1|X|A|836
7ASO|1|X|A|837
*
7ASO|1|X|U|867
7ASO|1|X|G|868
7ASO|1|X|C|869
7ASO|1|X|A|870
7ASO|1|X|G|871
*
7ASO|1|X|C|878
7ASO|1|X|A|879
7ASO|1|X|U|880
7ASO|1|X|U|881
7ASO|1|X|A|882
7ASO|1|X|A|883
7ASO|1|X|G|884
7ASO|1|X|C|885

Current chains

Chain X

16S

Nearby chains

Chain D

30S ribosomal protein S5

Chain F

30S ribosomal protein S8