J3_7ASP_008
3D structure
- PDB id
- 7ASP (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Staphylococcus aureus 70S after 50 minutes incubation at 37C
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.86 Å
Loop
- Sequence
- UCAG*CGAAC*GAUGAA
- Length
- 15 nucleotides
- Bulged bases
- 7ASP|1|Y|A|809
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- J3_7ASP_008 not in the Motif Atlas
- Geometric match to J3_5TBW_005
- Geometric discrepancy: 0.3115
- The information below is about J3_5TBW_005
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- J3_33851.1
- Basepair signature
- cWW-tSH-F-F-tHS-cWW-cWW-F-F
- Number of instances in this motif group
- 1
Unit IDs
7ASP|1|Y|U|742
7ASP|1|Y|C|743
7ASP|1|Y|A|744
7ASP|1|Y|G|745
*
7ASP|1|Y|C|777
7ASP|1|Y|G|778
7ASP|1|Y|A|779
7ASP|1|Y|A|780
7ASP|1|Y|C|781
*
7ASP|1|Y|G|805
7ASP|1|Y|A|806
7ASP|1|Y|U|807
7ASP|1|Y|G|808
7ASP|1|Y|A|809
7ASP|1|Y|A|810
Current chains
- Chain Y
- 23S rRNA
Nearby chains
- Chain C
- 50S ribosomal protein L2
Coloring options: