J3_7ASP_010
3D structure
- PDB id
- 7ASP (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Staphylococcus aureus 70S after 50 minutes incubation at 37C
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.86 Å
Loop
- Sequence
- UAAG*CGCAAAC*GUA
- Length
- 14 nucleotides
- Bulged bases
- 7ASP|1|Y|C|1651, 7ASP|1|Y|A|1653
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- J3_7ASP_010 not in the Motif Atlas
- Homologous match to J3_5J7L_042
- Geometric discrepancy: 0.3358
- The information below is about J3_5J7L_042
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- J3_19545.2
- Basepair signature
- cWW-F-F-tHS-cWW-cWW-F-F
- Number of instances in this motif group
- 6
Unit IDs
7ASP|1|Y|U|1343
7ASP|1|Y|A|1344
7ASP|1|Y|A|1345
7ASP|1|Y|G|1346
*
7ASP|1|Y|C|1649
7ASP|1|Y|G|1650
7ASP|1|Y|C|1651
7ASP|1|Y|A|1652
7ASP|1|Y|A|1653
7ASP|1|Y|A|1654
7ASP|1|Y|C|1655
*
7ASP|1|Y|G|1664
7ASP|1|Y|U|1665
7ASP|1|Y|A|1666
Current chains
- Chain Y
- 23S rRNA
Nearby chains
- Chain B
- 50S ribosomal protein L34
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