J3_7ASP_016
3D structure
- PDB id
- 7ASP (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Staphylococcus aureus 70S after 50 minutes incubation at 37C
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.86 Å
Loop
- Sequence
- CAUC*GUU*AUUAAAG
- Length
- 14 nucleotides
- Bulged bases
- 7ASP|1|Y|A|2545, 7ASP|1|Y|U|2546
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- J3_7ASP_016 not in the Motif Atlas
- Homologous match to J3_4WF9_009
- Geometric discrepancy: 0.1025
- The information below is about J3_4WF9_009
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- J3_32601.5
- Basepair signature
- cWW-tWH-cHW-F-cWW-tSS-F-cWW
- Number of instances in this motif group
- 4
Unit IDs
7ASP|1|Y|C|2544
7ASP|1|Y|A|2545
7ASP|1|Y|U|2546
7ASP|1|Y|C|2547
*
7ASP|1|Y|G|2572
7ASP|1|Y|U|2573
7ASP|1|Y|U|2574
*
7ASP|1|Y|A|2588
7ASP|1|Y|U|2589
7ASP|1|Y|U|2590
7ASP|1|Y|A|2591
7ASP|1|Y|A|2592
7ASP|1|Y|A|2593
7ASP|1|Y|G|2594
Current chains
- Chain Y
- 23S rRNA
Nearby chains
- Chain I
- 50S ribosomal protein L14
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