J3_7ASP_025
3D structure
- PDB id
- 7ASP (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Staphylococcus aureus 70S after 50 minutes incubation at 37C
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.86 Å
Loop
- Sequence
- CGAAU*AAUCAAAGAA*UGUAG
- Length
- 20 nucleotides
- Bulged bases
- 7ASP|1|Y|A|364
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- J3_7ASP_025 not in the Motif Atlas
- Homologous match to J3_4WF9_015
- Geometric discrepancy: 0.1425
- The information below is about J3_4WF9_015
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- J3_46299.2
- Basepair signature
- cWW-F-F-F-cHH-cWW-tHS-F-cWW-cSW-tHS-cWW
- Number of instances in this motif group
- 3
Unit IDs
7ASP|1|Y|C|340
7ASP|1|Y|G|341
7ASP|1|Y|A|342
7ASP|1|Y|A|343
7ASP|1|Y|U|344
*
7ASP|1|Y|A|359
7ASP|1|Y|A|360
7ASP|1|Y|U|361
7ASP|1|Y|C|362
7ASP|1|Y|A|363
7ASP|1|Y|A|364
7ASP|1|Y|A|365
7ASP|1|Y|G|366
7ASP|1|Y|A|367
7ASP|1|Y|A|368
*
7ASP|1|Y|U|380
7ASP|1|Y|G|381
7ASP|1|Y|U|382
7ASP|1|Y|A|383
7ASP|1|Y|G|384
Current chains
- Chain Y
- 23S rRNA
Nearby chains
- Chain E
- 50S ribosomal protein L4
- Chain S
- 50S ribosomal protein L24
Coloring options: