J3_7AZO_028
3D structure
- PDB id
- 7AZO (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- 70S thermus thermophilus ribosome with bound antibiotic lead SEQ-977
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.3 Å
Loop
- Sequence
- AC*GAUAAGC*GAUGU
- Length
- 14 nucleotides
- Bulged bases
- 7AZO|1|23SA|A|73
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- J3_7AZO_028 not in the Motif Atlas
- Homologous match to J3_9DFE_004
- Geometric discrepancy: 0.1313
- The information below is about J3_9DFE_004
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- J3_35667.2
- Basepair signature
- cWW-cWW-F-F-F-cWW-F-cWW
- Number of instances in this motif group
- 7
Unit IDs
7AZO|1|23SA|A|55
7AZO|1|23SA|C|56
*
7AZO|1|23SA|G|69
7AZO|1|23SA|A|70
7AZO|1|23SA|U|71
7AZO|1|23SA|A|72
7AZO|1|23SA|A|73
7AZO|1|23SA|G|74
7AZO|1|23SA|C|75
*
7AZO|1|23SA|G|108
7AZO|1|23SA|A|109
7AZO|1|23SA|U|110
7AZO|1|23SA|G|111
7AZO|1|23SA|U|112
Current chains
- Chain 23SA
- 23S rRNA
Nearby chains
- Chain L23A
- 50S ribosomal protein L23
- Chain L29A
- 50S ribosomal protein L29
- Chain L34A
- 50S ribosomal protein L34
Coloring options: