3D structure

PDB id
7AZO (explore in PDB, NAKB, or RNA 3D Hub)
Description
70S thermus thermophilus ribosome with bound antibiotic lead SEQ-977
Experimental method
X-RAY DIFFRACTION
Resolution
3.3 Å

Loop

Sequence
CGUAAG*CGG*UCAG
Length
13 nucleotides
Bulged bases
None detected
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
J3_7AZO_045 not in the Motif Atlas
Homologous match to J3_8VTW_004
Geometric discrepancy: 0.0624
The information below is about J3_8VTW_004
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
J3_32852.5
Basepair signature
cWW-cWW-cWW-cWW-tSH-F-F-F
Number of instances in this motif group
5

Unit IDs

7AZO|1|23SB|C|1347
7AZO|1|23SB|G|1348
7AZO|1|23SB|U|1349
7AZO|1|23SB|A|1350
7AZO|1|23SB|A|1351
7AZO|1|23SB|G|1352
*
7AZO|1|23SB|C|1674
7AZO|1|23SB|G|1675
7AZO|1|23SB|G|1676
*
7AZO|1|23SB|U|1689
7AZO|1|23SB|C|1690
7AZO|1|23SB|A|1691
7AZO|1|23SB|G|1692

Current chains

Chain 23SB
23S rRNA

Nearby chains

No other chains within 10Å

Coloring options:


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