J3_7AZO_063

3D structure

PDB id

7AZO (explore in PDB, NAKB, or RNA 3D Hub)

Description

70S thermus thermophilus ribosome with bound antibiotic lead SEQ-977

Experimental method

X-RAY DIFFRACTION

Resolution

3.3 Å

Loop

Sequence

CUAGGGAAC*GGUGCCC*GGGAGCCCUAG

Length

27 nucleotides

Bulged bases

7AZO|1|16SB|A|1663

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7AZO|1|16SB|C|1622
7AZO|1|16SB|U|1623
7AZO|1|16SB|A|1624
7AZO|1|16SB|G|1625
7AZO|1|16SB|G|1626
7AZO|1|16SB|G|1627
7AZO|1|16SB|A|1628
7AZO|1|16SB|A|1629
7AZO|1|16SB|C|1630
*
7AZO|1|16SB|G|1647
7AZO|1|16SB|G|1648
7AZO|1|16SB|U|1649
7AZO|1|16SB|G|1650
7AZO|1|16SB|C|1651
7AZO|1|16SB|C|1652
7AZO|1|16SB|C|1653
*
7AZO|1|16SB|G|1660
7AZO|1|16SB|G|1661
7AZO|1|16SB|G|1662
7AZO|1|16SB|A|1663
7AZO|1|16SB|G|1664
7AZO|1|16SB|C|1665
7AZO|1|16SB|C|1666
7AZO|1|16SB|C|1667
7AZO|1|16SB|U|1668
7AZO|1|16SB|A|1669
7AZO|1|16SB|G|1670

Current chains

Chain 16SB

16S rRNA

Nearby chains

Chain S3B

30S ribosomal protein S3