J3_7AZO_076

3D structure

PDB id

7AZO (explore in PDB, NAKB, or RNA 3D Hub)

Description

70S thermus thermophilus ribosome with bound antibiotic lead SEQ-977

Experimental method

X-RAY DIFFRACTION

Resolution

3.3 Å

Loop

Sequence

GAACC*GGGUGCC*GGAGC

Length

17 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7AZO|1|16SA|G|1627
7AZO|1|16SA|A|1628
7AZO|1|16SA|A|1629
7AZO|1|16SA|C|1630
7AZO|1|16SA|C|1631
*
7AZO|1|16SA|G|1646
7AZO|1|16SA|G|1647
7AZO|1|16SA|G|1648
7AZO|1|16SA|U|1649
7AZO|1|16SA|G|1650
7AZO|1|16SA|C|1651
7AZO|1|16SA|C|1652
*
7AZO|1|16SA|G|1661
7AZO|1|16SA|G|1662
7AZO|1|16SA|A|1663
7AZO|1|16SA|G|1664
7AZO|1|16SA|C|1665

Current chains

Chain 16SA

16S rRNA

Nearby chains

Chain 23SB

Large subunit ribosomal RNA; LSU rRNA