J3_7AZS_003
3D structure
- PDB id
- 7AZS (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- 70S thermus thermophilus ribosome with bound antibiotic lead SEQ-569
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.1 Å
Loop
- Sequence
- UG*CGCCGAUGG*CAG
- Length
- 14 nucleotides
- Bulged bases
- 7AZS|1|16SA|U|1352
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- J3_7AZS_003 not in the Motif Atlas
- Homologous match to J3_6CZR_017
- Geometric discrepancy: 0.0987
- The information below is about J3_6CZR_017
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- J3_11934.3
- Basepair signature
- cWW-F-cWW-F-F-tWW-F-cWW-F
- Number of instances in this motif group
- 5
Unit IDs
7AZS|1|16SA|U|1301
7AZS|1|16SA|G|1302
*
7AZS|1|16SA|C|1346
7AZS|1|16SA|G|1347
7AZS|1|16SA|C|1348
7AZS|1|16SA|C|1349
7AZS|1|16SA|G|1350
7AZS|1|16SA|A|1351
7AZS|1|16SA|U|1352
7AZS|1|16SA|G|1353
7AZS|1|16SA|G|1354
*
7AZS|1|16SA|C|1361
7AZS|1|16SA|A|1362
7AZS|1|16SA|G|1363
Current chains
- Chain 16SA
- 16S rRNA
Nearby chains
- Chain MRNA
- mRNA
- Chain S11A
- 30S ribosomal protein S11
- Chain S15A
- 30S ribosomal protein S15
- Chain S18A
- 30S ribosomal protein S18
- Chain S6A
- 30S ribosomal protein S6
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