J3_7AZS_010
3D structure
- PDB id
- 7AZS (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- 70S thermus thermophilus ribosome with bound antibiotic lead SEQ-569
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.1 Å
Loop
- Sequence
- CGUCAG*CGCAACC*GACGACG
- Length
- 20 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- J3_7AZS_010 not in the Motif Atlas
- Homologous match to J3_4LFB_007
- Geometric discrepancy: 0.0839
- The information below is about J3_4LFB_007
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- J3_01343.1
- Basepair signature
- cWW-tSS-F-F-tWH-F-F-cWW-F-cWW-F-F-F-F-F
- Number of instances in this motif group
- 2
Unit IDs
7AZS|1|16SA|C|1691
7AZS|1|16SA|G|1692
7AZS|1|16SA|U|1693
7AZS|1|16SA|C|1694
7AZS|1|16SA|A|1695
7AZS|1|16SA|G|1696
*
7AZS|1|16SA|C|1735
7AZS|1|16SA|G|1736
7AZS|1|16SA|C|1737
7AZS|1|16SA|A|1738
7AZS|1|16SA|A|1739
7AZS|1|16SA|C|1740
7AZS|1|16SA|C|1741
*
7AZS|1|16SA|G|1814
7AZS|1|16SA|A|1815
7AZS|1|16SA|C|1816
7AZS|1|16SA|G|1817
7AZS|1|16SA|A|1818
7AZS|1|16SA|C|1819
7AZS|1|16SA|G|1820
Current chains
- Chain 16SA
- 16S rRNA
Nearby chains
- Chain S10A
- 30S ribosomal protein S10
- Chain S14A
- 30S ribosomal protein S14 type Z
- Chain S2A
- 30S ribosomal protein S2
- Chain S3A
- 30S ribosomal protein S3
- Chain S5A
- 30S ribosomal protein S5
- Chain S7A
- 30S ribosomal protein S7
- Chain S9A
- 30S ribosomal protein S9
Coloring options: