J3_7AZS_019
3D structure
- PDB id
- 7AZS (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- 70S thermus thermophilus ribosome with bound antibiotic lead SEQ-569
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.1 Å
Loop
- Sequence
- UGGA*UAC*GGAA
- Length
- 11 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- J3_7AZS_019 not in the Motif Atlas
- Homologous match to J3_4LFB_003
- Geometric discrepancy: 0.1232
- The information below is about J3_4LFB_003
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- J3_44359.1
- Basepair signature
- cWW-tSH-cWW-F-cWW-cWW
- Number of instances in this motif group
- 5
Unit IDs
7AZS|1|16SB|U|1566
7AZS|1|16SB|G|1567
7AZS|1|16SB|G|1568
7AZS|1|16SB|A|1569
*
7AZS|1|16SB|U|1862
7AZS|1|16SB|A|1863
7AZS|1|16SB|C|1864
*
7AZS|1|16SB|G|1964
7AZS|1|16SB|G|1965
7AZS|1|16SB|A|1966
7AZS|1|16SB|A|1967
Current chains
- Chain 16SB
- 16S rRNA
Nearby chains
- Chain ESIB
- Transfer RNA; tRNA
- Chain PSIB
- Transfer RNA; tRNA
- Chain S13B
- 30S ribosomal protein S13
- Chain S9B
- 30S ribosomal protein S9
- Chain THXB
- 30S ribosomal protein Thx
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