J3_7AZS_025
3D structure
- PDB id
- 7AZS (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- 70S thermus thermophilus ribosome with bound antibiotic lead SEQ-569
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.1 Å
Loop
- Sequence
- CGC*GGACUGC*GAGGAAGGAG
- Length
- 20 nucleotides
- Bulged bases
- 7AZS|1|16SB|A|1810
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- J3_7AZS_025 not in the Motif Atlas
- Homologous match to J3_4LFB_018
- Geometric discrepancy: 0.1887
- The information below is about J3_4LFB_018
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- J3_40706.1
- Basepair signature
- cWW-F-cHW-cWW-tWH-cWW-F-tSW-tWS-cSH-cWW-cWW
- Number of instances in this motif group
- 2
Unit IDs
7AZS|1|16SB|C|1744
7AZS|1|16SB|G|1745
7AZS|1|16SB|C|1746
*
7AZS|1|16SB|G|1783
7AZS|1|16SB|G|1784
7AZS|1|16SB|A|1785
7AZS|1|16SB|C|1786
7AZS|1|16SB|U|1787
7AZS|1|16SB|G|1788
7AZS|1|16SB|C|1789
*
7AZS|1|16SB|G|1802
7AZS|1|16SB|A|1803
7AZS|1|16SB|G|1804
7AZS|1|16SB|G|1805
7AZS|1|16SB|A|1806
7AZS|1|16SB|A|1807
7AZS|1|16SB|G|1808
7AZS|1|16SB|G|1809
7AZS|1|16SB|A|1810
7AZS|1|16SB|G|1811
Current chains
- Chain 16SB
- 16S rRNA
Nearby chains
- Chain S10B
- 30S ribosomal protein S10
- Chain S14B
- 30S ribosomal protein S14 type Z
- Chain S2B
- 30S ribosomal protein S2
- Chain S7B
- 30S ribosomal protein S7
- Chain S9B
- 30S ribosomal protein S9
Coloring options: