J3_7AZS_043
3D structure
- PDB id
- 7AZS (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- 70S thermus thermophilus ribosome with bound antibiotic lead SEQ-569
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.1 Å
Loop
- Sequence
- CGAGCUA*UAG*CGAG
- Length
- 14 nucleotides
- Bulged bases
- 7AZS|1|23SB|G|735, 7AZS|1|23SB|G|841
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- J3_7AZS_043 not in the Motif Atlas
- Homologous match to J3_9DFE_007
- Geometric discrepancy: 0.1163
- The information below is about J3_9DFE_007
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- J3_46658.1
- Basepair signature
- cWW-tWH-cWW-tSW-F-F-cWW
- Number of instances in this motif group
- 10
Unit IDs
7AZS|1|23SB|C|732
7AZS|1|23SB|G|733
7AZS|1|23SB|A|734
7AZS|1|23SB|G|735
7AZS|1|23SB|C|736
7AZS|1|23SB|U|737
7AZS|1|23SB|A|738
*
7AZS|1|23SB|U|822
7AZS|1|23SB|A|823
7AZS|1|23SB|G|824
*
7AZS|1|23SB|C|840
7AZS|1|23SB|G|841
7AZS|1|23SB|A|842
7AZS|1|23SB|G|843
Current chains
- Chain 23SB
- 23S rRNA
Nearby chains
- Chain L2B
- 50S ribosomal protein L2
- Chain L34B
- 50S ribosomal protein L34
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