J3_7AZS_051
3D structure
- PDB id
- 7AZS (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- 70S thermus thermophilus ribosome with bound antibiotic lead SEQ-569
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.1 Å
Loop
- Sequence
- CAC*GGUAAG*CGAGG
- Length
- 14 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- J3_7AZS_051 not in the Motif Atlas
- Homologous match to J3_4WF9_020
- Geometric discrepancy: 0.2377
- The information below is about J3_4WF9_020
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- J3_24127.1
- Basepair signature
- cWW-F-cWW-tWH-F-F-tHS-cWW
- Number of instances in this motif group
- 2
Unit IDs
7AZS|1|23SB|C|2805
7AZS|1|23SB|A|2806
7AZS|1|23SB|C|2807
*
7AZS|1|23SB|G|2819
7AZS|1|23SB|G|2820
7AZS|1|23SB|U|2821
7AZS|1|23SB|A|2822
7AZS|1|23SB|A|2823
7AZS|1|23SB|G|2824
*
7AZS|1|23SB|C|2902
7AZS|1|23SB|G|2903
7AZS|1|23SB|A|2904
7AZS|1|23SB|G|2905
7AZS|1|23SB|G|2906
Current chains
- Chain 23SB
- 23S rRNA
Nearby chains
- Chain L22B
- 50S ribosomal protein L22
- Chain L3B
- 50S ribosomal protein L3
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