J3_7AZY_021
3D structure
- PDB id
- 7AZY (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Context-specific inhibition of eukaryotic translation by macrolide antibiotics
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.877 Å
Loop
- Sequence
- CGAUAGCGAACAAGUAC*GGAAAG*CUUG
- Length
- 27 nucleotides
- Bulged bases
- 7AZY|1|E|U|343, 7AZY|1|E|A|351, 7AZY|1|G|U|23
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- J3_7AZY_021 not in the Motif Atlas
- Homologous match to J3_8P9A_045
- Geometric discrepancy: 0.0584
- The information below is about J3_8P9A_045
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- J3_30040.2
- Basepair signature
- cWW-tWH-F-cWW-tSS-tHH-cSS-tWH-tSW-tHS-cWW-tWH-F-cSH-tSS-F-F
- Number of instances in this motif group
- 7
Unit IDs
7AZY|1|E|C|340
7AZY|1|E|G|341
7AZY|1|E|A|342
7AZY|1|E|U|343
7AZY|1|E|A|344
7AZY|1|E|G|345
7AZY|1|E|C|346
7AZY|1|E|G|347
7AZY|1|E|A|348
7AZY|1|E|A|349
7AZY|1|E|C|350
7AZY|1|E|A|351
7AZY|1|E|A|352
7AZY|1|E|G|353
7AZY|1|E|U|354
7AZY|1|E|A|355
7AZY|1|E|C|356
*
7AZY|1|E|G|363
7AZY|1|E|G|364
7AZY|1|E|A|365
7AZY|1|E|A|366
7AZY|1|E|A|367
7AZY|1|E|G|368
*
7AZY|1|G|C|21
7AZY|1|G|U|22
7AZY|1|G|U|23
7AZY|1|G|G|24
Current chains
- Chain E
- 25S ribosomal RNA
- Chain G
- 5.8S ribosomal RNA
Nearby chains
- Chain M
- 60S ribosomal protein L39
- Chain g
- 60S ribosomal protein L37-A
- Chain p
- 60S ribosomal protein L4-A
- Chain q
- 60S ribosomal protein L26-A
Coloring options: