J3_7AZY_022
3D structure
- PDB id
- 7AZY (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Context-specific inhibition of eukaryotic translation by macrolide antibiotics
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.877 Å
Loop
- Sequence
- AUGAAAAGAAC*GAGUGAAAAAGUACG*CU
- Length
- 28 nucleotides
- Bulged bases
- 7AZY|1|E|A|398, 7AZY|1|E|A|402
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- J3_7AZY_022 not in the Motif Atlas
- Homologous match to J3_8C3A_049
- Geometric discrepancy: 0.0963
- The information below is about J3_8C3A_049
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- J3_91149.1
- Basepair signature
- cWW-cWS-tSH-F-tWH-cSS-cWW-tSS-tSH-tSH-tWW-tHH-tWH-tWW-F-F-cSS-F-cWW-cWW
- Number of instances in this motif group
- 6
Unit IDs
7AZY|1|E|A|369
7AZY|1|E|U|370
7AZY|1|E|G|371
7AZY|1|E|A|372
7AZY|1|E|A|373
7AZY|1|E|A|374
7AZY|1|E|A|375
7AZY|1|E|G|376
7AZY|1|E|A|377
7AZY|1|E|A|378
7AZY|1|E|C|379
*
7AZY|1|E|G|390
7AZY|1|E|A|391
7AZY|1|E|G|392
7AZY|1|E|U|393
7AZY|1|E|G|394
7AZY|1|E|A|395
7AZY|1|E|A|396
7AZY|1|E|A|397
7AZY|1|E|A|398
7AZY|1|E|A|399
7AZY|1|E|G|400
7AZY|1|E|U|401
7AZY|1|E|A|402
7AZY|1|E|C|403
7AZY|1|E|G|404
*
7AZY|1|G|C|19
7AZY|1|G|U|20
Current chains
- Chain E
- 25S ribosomal RNA
- Chain G
- 5.8S ribosomal RNA
Nearby chains
- Chain M
- 60S ribosomal protein L39
- Chain p
- 60S ribosomal protein L4-A
- Chain q
- 60S ribosomal protein L26-A
- Chain y
- 60S ribosomal protein L17-A
Coloring options: