J3_7BGE_005
3D structure
- PDB id
- 7BGE (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Staphylococcus aureus 30S ribosomal subunit in presence of spermidine (head only)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.6 Å
Loop
- Sequence
- UUGACAAC*GCCUUC*GGACA
- Length
- 19 nucleotides
- Bulged bases
- 7BGE|1|a|A|1014, 7BGE|1|a|C|1015, 7BGE|1|a|G|1047
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
7BGE|1|a|U|1011
7BGE|1|a|U|1012
7BGE|1|a|G|1013
7BGE|1|a|A|1014
7BGE|1|a|C|1015
7BGE|1|a|A|1016
7BGE|1|a|A|1017
7BGE|1|a|C|1018
*
7BGE|1|a|G|1031
7BGE|1|a|C|1032
7BGE|1|a|C|1033
7BGE|1|a|U|1034
7BGE|1|a|U|1035
7BGE|1|a|C|1036
*
7BGE|1|a|G|1046
7BGE|1|a|G|1047
7BGE|1|a|A|1048
7BGE|1|a|C|1049
7BGE|1|a|A|1050
Current chains
- Chain a
- 16S ribosomal RNA
Nearby chains
- Chain c
- 30S ribosomal protein S3
- Chain n
- 30S ribosomal protein S14 type Z
Coloring options: