J3_7BHP_021

3D structure

PDB id

7BHP (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of the human Ebp1 - 80S ribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

3.3 Å

Loop

Sequence

CAGUCC*GGUGCG*CGACG

Length

17 nucleotides

Bulged bases

7BHP|1|L5|C|704

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7BHP|1|L5|C|451
7BHP|1|L5|A|452
7BHP|1|L5|G|453
7BHP|1|L5|U|454
7BHP|1|L5|C|455
7BHP|1|L5|C|456
*
7BHP|1|L5|G|700
7BHP|1|L5|G|701
7BHP|1|L5|U|702
7BHP|1|L5|G|703
7BHP|1|L5|C|704
7BHP|1|L5|G|705
*
7BHP|1|L5|C|1292
7BHP|1|L5|G|1293
7BHP|1|L5|A|1294
7BHP|1|L5|C|1295
7BHP|1|L5|G|1296

Current chains

Chain L5

28S ribosomal RNA

Nearby chains

Chain LE

60S ribosomal protein L6

Chain Le

60S ribosomal protein L32

Chain Lf

60S ribosomal protein L35a

Chain Lr

60S ribosomal protein L28