J3_7BT6_021
3D structure
- PDB id
- 7BT6 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM structure of pre-60S ribosome from Saccharomyces cerevisiae rpl4delta63-87 strain at 3.12 Angstroms resolution(state R1)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.12 Å
Loop
- Sequence
- UCUUCA*UAACUGAAU*AGGAAGGAAUA
- Length
- 26 nucleotides
- Bulged bases
- 7BT6|1|1|U|1629, 7BT6|1|1|U|1815
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
7BT6|1|1|U|1627
7BT6|1|1|C|1628
7BT6|1|1|U|1629
7BT6|1|1|U|1630
7BT6|1|1|C|1631
7BT6|1|1|A|1632
*
7BT6|1|1|U|1641
7BT6|1|1|A|1642
7BT6|1|1|A|1643
7BT6|1|1|C|1644
7BT6|1|1|U|1645
7BT6|1|1|G|1646
7BT6|1|1|A|1647
7BT6|1|1|A|1648
7BT6|1|1|U|1649
*
7BT6|1|1|A|1806
7BT6|1|1|G|1807
7BT6|1|1|G|1808
7BT6|1|1|A|1809
7BT6|1|1|A|1810
7BT6|1|1|G|1811
7BT6|1|1|G|1812
7BT6|1|1|A|1813
7BT6|1|1|A|1814
7BT6|1|1|U|1815
7BT6|1|1|A|1816
Current chains
- Chain 1
- RDN25-1 rRNA
Nearby chains
- Chain A
- 60S ribosomal protein L2-A
- Chain Z
- 60S ribosomal protein L27-A
- Chain g
- 60S ribosomal protein L34-A
Coloring options: