J3_7D80_002
3D structure
- PDB id
- 7D80 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Molecular model of the cryo-EM structure of 70S ribosome in complex with peptide deformylase, trigger factor, and methionine aminopeptidase
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 4.1 Å
Loop
- Sequence
- GAC*GAUAAGC*GAUUUC
- Length
- 16 nucleotides
- Bulged bases
- 7D80|1|A|A|74
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
7D80|1|A|G|55
7D80|1|A|A|56
7D80|1|A|C|57
*
7D80|1|A|G|70
7D80|1|A|A|71
7D80|1|A|U|72
7D80|1|A|A|73
7D80|1|A|A|74
7D80|1|A|G|75
7D80|1|A|C|76
*
7D80|1|A|G|110
7D80|1|A|A|111
7D80|1|A|U|112
7D80|1|A|U|113
7D80|1|A|U|114
7D80|1|A|C|115
Current chains
- Chain A
- 23S ribosomal RNA
Nearby chains
- Chain 0
- 50S ribosomal protein L34
- Chain W
- 50S ribosomal protein L23
- Chain w
- 50S ribosomal protein L29
Coloring options: