J3_7D80_008
3D structure
- PDB id
- 7D80 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Molecular model of the cryo-EM structure of 70S ribosome in complex with peptide deformylase, trigger factor, and methionine aminopeptidase
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 4.1 Å
Loop
- Sequence
- GCA*UCAUAGUGAUCCGG*UCGCUCAAC
- Length
- 26 nucleotides
- Bulged bases
- 7D80|1|A|A|2426
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
7D80|1|A|G|2282
7D80|1|A|C|2283
7D80|1|A|A|2284
*
7D80|1|A|U|2384
7D80|1|A|C|2385
7D80|1|A|A|2386
7D80|1|A|U|2387
7D80|1|A|A|2388
7D80|1|A|G|2389
7D80|1|A|U|2390
7D80|1|A|G|2391
7D80|1|A|A|2392
7D80|1|A|U|2393
7D80|1|A|C|2394
7D80|1|A|C|2395
7D80|1|A|G|2396
7D80|1|A|G|2397
*
7D80|1|A|U|2419
7D80|1|A|C|2420
7D80|1|A|G|2421
7D80|1|A|C|2422
7D80|1|A|U|2423
7D80|1|A|C|2424
7D80|1|A|A|2425
7D80|1|A|A|2426
7D80|1|A|C|2427
Current chains
- Chain A
- 23S ribosomal RNA
Nearby chains
- Chain 1
- 50S ribosomal protein L35
- Chain X
- Transfer RNA; tRNA
- Chain k
- 50S ribosomal protein L15
- Chain u
- 50S ribosomal protein L27
- Chain z
- 50S ribosomal protein L33
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