J3_7D80_022
3D structure
- PDB id
- 7D80 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Molecular model of the cryo-EM structure of 70S ribosome in complex with peptide deformylase, trigger factor, and methionine aminopeptidase
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 4.1 Å
Loop
- Sequence
- GUGGAUGC*GCGAAAAGAAC*GAGUGAAAAAGAACCUGAAAC
- Length
- 40 nucleotides
- Bulged bases
- 7D80|1|A|A|504, 7D80|1|A|A|508
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
7D80|1|A|G|24
7D80|1|A|U|25
7D80|1|A|G|26
7D80|1|A|G|27
7D80|1|A|A|28
7D80|1|A|U|29
7D80|1|A|G|30
7D80|1|A|C|31
*
7D80|1|A|G|474
7D80|1|A|C|475
7D80|1|A|G|476
7D80|1|A|A|477
7D80|1|A|A|478
7D80|1|A|A|479
7D80|1|A|A|480
7D80|1|A|G|481
7D80|1|A|A|482
7D80|1|A|A|483
7D80|1|A|C|484
*
7D80|1|A|G|496
7D80|1|A|A|497
7D80|1|A|G|498
7D80|1|A|U|499
7D80|1|A|G|500
7D80|1|A|A|501
7D80|1|A|A|502
7D80|1|A|A|503
7D80|1|A|A|504
7D80|1|A|A|505
7D80|1|A|G|506
7D80|1|A|A|507
7D80|1|A|A|508
7D80|1|A|C|509
7D80|1|A|C|510
7D80|1|A|U|511
7D80|1|A|G|512
7D80|1|A|A|513
7D80|1|A|A|514
7D80|1|A|A|515
7D80|1|A|C|516
Current chains
- Chain A
- 23S ribosomal RNA
Nearby chains
- Chain 6
- 50S ribosomal protein L32
- Chain p
- 50S ribosomal protein L20
- Chain r
- 50S ribosomal protein L22
- Chain s
- 50S ribosomal protein L24
Coloring options: