J3_7D80_029

3D structure

PDB id

7D80 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Molecular model of the cryo-EM structure of 70S ribosome in complex with peptide deformylase, trigger factor, and methionine aminopeptidase

Experimental method

ELECTRON MICROSCOPY

Resolution

4.1 Å

Loop

Sequence

GGGGACG*CC*GAAAAGCC

Length

17 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7D80|1|A|G|1423
7D80|1|A|G|1424
7D80|1|A|G|1425
7D80|1|A|G|1426
7D80|1|A|A|1427
7D80|1|A|C|1428
7D80|1|A|G|1429
*
7D80|1|A|C|1564
7D80|1|A|C|1565
*
7D80|1|A|G|1568
7D80|1|A|A|1569
7D80|1|A|A|1570
7D80|1|A|A|1571
7D80|1|A|A|1572
7D80|1|A|G|1573
7D80|1|A|C|1574
7D80|1|A|C|1575

Current chains

Chain A

23S ribosomal RNA

Nearby chains

Chain b

50S ribosomal protein L2