J3_7D80_032
3D structure
- PDB id
- 7D80 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Molecular model of the cryo-EM structure of 70S ribosome in complex with peptide deformylase, trigger factor, and methionine aminopeptidase
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 4.1 Å
Loop
- Sequence
- GGCUAAU*AGGUUAG*CAUAAGCC
- Length
- 22 nucleotides
- Bulged bases
- 7D80|1|A|U|2334, 7D80|1|A|A|2336
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
7D80|1|A|G|2293
7D80|1|A|G|2294
7D80|1|A|C|2295
7D80|1|A|U|2296
7D80|1|A|A|2297
7D80|1|A|A|2298
7D80|1|A|U|2299
*
7D80|1|A|A|2317
7D80|1|A|G|2318
7D80|1|A|G|2319
7D80|1|A|U|2320
7D80|1|A|U|2321
7D80|1|A|A|2322
7D80|1|A|G|2323
*
7D80|1|A|C|2332
7D80|1|A|A|2333
7D80|1|A|U|2334
7D80|1|A|A|2335
7D80|1|A|A|2336
7D80|1|A|G|2337
7D80|1|A|C|2338
7D80|1|A|C|2339
Current chains
- Chain A
- 23S ribosomal RNA
Nearby chains
- Chain a
- 5S ribosomal RNA; 5S rRNA
- Chain e
- 50S ribosomal protein L5
- Chain n
- 50S ribosomal protein L18
- Chain u
- 50S ribosomal protein L27
Coloring options: