J3_7F0D_008

3D structure

PDB id

7F0D (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of Mycobacterium tuberculosis 50S ribosome subunit bound with clarithromycin

Experimental method

ELECTRON MICROSCOPY

Resolution

3.3 Å

Loop

Sequence

CGCCCGU*AAG*CGAG

Length

14 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7F0D|1|A|C|1547
7F0D|1|A|G|1548
7F0D|1|A|C|1549
7F0D|1|A|C|1550
7F0D|1|A|C|1551
7F0D|1|A|G|1552
7F0D|1|A|U|1553
*
7F0D|1|A|A|1652
7F0D|1|A|A|1653
7F0D|1|A|G|1654
*
7F0D|1|A|C|1818
7F0D|1|A|G|1819
7F0D|1|A|A|1820
7F0D|1|A|G|1821

Current chains

Chain A

23S rRNA

Nearby chains