J3_7F0D_020
3D structure
- PDB id
- 7F0D (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM structure of Mycobacterium tuberculosis 50S ribosome subunit bound with clarithromycin
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.3 Å
Loop
- Sequence
- CAGGAGGUUG*CACCCUUGAAAGAGUG*CUCACUG
- Length
- 33 nucleotides
- Bulged bases
- 7F0D|1|A|U|1190, 7F0D|1|A|U|1211, 7F0D|1|A|G|1212, 7F0D|1|A|A|1213, 7F0D|1|A|G|1218
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
7F0D|1|A|C|1182
7F0D|1|A|A|1183
7F0D|1|A|G|1184
7F0D|1|A|G|1185
7F0D|1|A|A|1186
7F0D|1|A|G|1187
7F0D|1|A|G|1188
7F0D|1|A|U|1189
7F0D|1|A|U|1190
7F0D|1|A|G|1191
*
7F0D|1|A|C|1205
7F0D|1|A|A|1206
7F0D|1|A|C|1207
7F0D|1|A|C|1208
7F0D|1|A|C|1209
7F0D|1|A|U|1210
7F0D|1|A|U|1211
7F0D|1|A|G|1212
7F0D|1|A|A|1213
7F0D|1|A|A|1214
7F0D|1|A|A|1215
7F0D|1|A|G|1216
7F0D|1|A|A|1217
7F0D|1|A|G|1218
7F0D|1|A|U|1219
7F0D|1|A|G|1220
*
7F0D|1|A|C|1229
7F0D|1|A|U|1230
7F0D|1|A|C|1231
7F0D|1|A|A|1232
7F0D|1|A|C|1233
7F0D|1|A|U|1234
7F0D|1|A|G|1235
Current chains
- Chain A
- 23S rRNA
Nearby chains
- Chain 4
- 50S ribosomal protein L36
- Chain M
- 50S ribosomal protein L16
- Chain V
- 50S ribosomal protein L25
Coloring options: