J3_7F5S_010

3D structure

PDB id

7F5S (explore in PDB, NAKB, or RNA 3D Hub)

Description

human delta-METTL18 60S ribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

2.72 Å

Loop

Sequence

AGAUG*CAGU*AGGGUGUAAAU

Length

20 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7F5S|1|L5|A|2551
7F5S|1|L5|G|2552
7F5S|1|L5|A|2553
7F5S|1|L5|U|2554
7F5S|1|L5|G|2555
*
7F5S|1|L5|C|2572
7F5S|1|L5|A|2573
7F5S|1|L5|G|2574
7F5S|1|L5|U|2575
*
7F5S|1|L5|A|2757
7F5S|1|L5|G|2758
7F5S|1|L5|G|2759
7F5S|1|L5|G|2760
7F5S|1|L5|U|2761
7F5S|1|L5|G|2762
7F5S|1|L5|U|2763
7F5S|1|L5|A|2764
7F5S|1|L5|A|2765
7F5S|1|L5|A|2766
7F5S|1|L5|U|2767

Current chains

Chain L5

28S rRNA

Nearby chains

Chain LZ

60S ribosomal protein L27