3D structure

PDB id
7F5S (explore in PDB, NAKB, or RNA 3D Hub)
Description
human delta-METTL18 60S ribosome
Experimental method
ELECTRON MICROSCOPY
Resolution
2.72 Å

Loop

Sequence
CGG*CUGAC*GGACAG
Length
14 nucleotides
Bulged bases
None detected
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
J3_7F5S_012 not in the Motif Atlas
Geometric match to J3_8VTW_006
Geometric discrepancy: 0.1314
The information below is about J3_8VTW_006
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
J3_89368.4
Basepair signature
cWW-tSH-tHW-F-cWW-tHH-cWW
Number of instances in this motif group
3

Unit IDs

7F5S|1|L5|C|3937
7F5S|1|L5|G|3938
7F5S|1|L5|G|3939
*
7F5S|1|L5|C|4074
7F5S|1|L5|U|4075
7F5S|1|L5|G|4076
7F5S|1|L5|A|4077
7F5S|1|L5|C|4078
*
7F5S|1|L5|G|4168
7F5S|1|L5|G|4169
7F5S|1|L5|A|4170
7F5S|1|L5|C|4171
7F5S|1|L5|A|4172
7F5S|1|L5|G|4173

Current chains

Chain L5
28S rRNA

Nearby chains

Chain LA
60S ribosomal protein L8
Chain LG
60S ribosomal protein L7a
Chain LN
60S ribosomal protein L15

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