J3_7F5S_014

3D structure

PDB id

7F5S (explore in PDB, NAKB, or RNA 3D Hub)

Description

human delta-METTL18 60S ribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

2.72 Å

Loop

Sequence

UAUC*GU(PSU)(OMG)G*CCACUAAUA

Length

18 nucleotides

Bulged bases

7F5S|1|L5|A|4464, 7F5S|1|L5|U|4465

QA status

Modified nucleotides: PSU, OMG

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7F5S|1|L5|U|4463
7F5S|1|L5|A|4464
7F5S|1|L5|U|4465
7F5S|1|L5|C|4466
*
7F5S|1|L5|G|4491
7F5S|1|L5|U|4492
7F5S|1|L5|PSU|4493
7F5S|1|L5|OMG|4494
7F5S|1|L5|G|4495
*
7F5S|1|L5|C|4505
7F5S|1|L5|C|4506
7F5S|1|L5|A|4507
7F5S|1|L5|C|4508
7F5S|1|L5|U|4509
7F5S|1|L5|A|4510
7F5S|1|L5|A|4511
7F5S|1|L5|U|4512
7F5S|1|L5|A|4513

Current chains

Chain L5

28S rRNA

Nearby chains

Chain LB

60S ribosomal protein L3

Chain LO

60S ribosomal protein L13a

Chain LV

60S ribosomal protein L23