J3_7JQB_012
3D structure
- PDB id
- 7JQB (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- SARS-CoV-2 Nsp1 and rabbit 40S ribosome complex
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.7 Å
Loop
- Sequence
- CUGGC*GGACAAG*CCCGAGAUUG
- Length
- 22 nucleotides
- Bulged bases
- 7JQB|1|A|U|1477
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
7JQB|1|A|C|1391
7JQB|1|A|U|1392
7JQB|1|A|G|1393
7JQB|1|A|G|1394
7JQB|1|A|C|1395
*
7JQB|1|A|G|1450
7JQB|1|A|G|1451
7JQB|1|A|A|1452
7JQB|1|A|C|1453
7JQB|1|A|A|1454
7JQB|1|A|A|1455
7JQB|1|A|G|1456
*
7JQB|1|A|C|1470
7JQB|1|A|C|1471
7JQB|1|A|C|1472
7JQB|1|A|G|1473
7JQB|1|A|A|1474
7JQB|1|A|G|1475
7JQB|1|A|A|1476
7JQB|1|A|U|1477
7JQB|1|A|U|1478
7JQB|1|A|G|1479
Current chains
- Chain A
- rRNA
Nearby chains
- Chain E
- Ribosomal protein S3
- Chain G
- uS7
- Chain R
- Uncharacterized protein
- Chain S
- eS17
- Chain V
- uS10
- Chain h
- RACK1
Coloring options: