J3_7JSW_005

3D structure

PDB id

7JSW (explore in PDB, NAKB, or RNA 3D Hub)

Description

ArfB Rescue of a 70S Ribosome stalled on truncated mRNA with a partial A-site codon (+2-III)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.8 Å

Loop

Sequence

CAGGA*UUUAAAG*CACUG

Length

17 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7JSW|1|1|C|1053
7JSW|1|1|A|1054
7JSW|1|1|G|1055
7JSW|1|1|G|1056
7JSW|1|1|A|1057
*
7JSW|1|1|U|1081
7JSW|1|1|U|1082
7JSW|1|1|U|1083
7JSW|1|1|A|1084
7JSW|1|1|A|1085
7JSW|1|1|A|1086
7JSW|1|1|G|1087
*
7JSW|1|1|C|1102
7JSW|1|1|A|1103
7JSW|1|1|C|1104
7JSW|1|1|U|1105
7JSW|1|1|G|1106

Current chains

Chain 1

23S ribosomal RNA

Nearby chains

Chain F

50S ribosomal protein L36