3D structure

PDB id
7JSW (explore in PDB, NAKB, or RNA 3D Hub)
Description
ArfB Rescue of a 70S Ribosome stalled on truncated mRNA with a partial A-site codon (+2-III)
Experimental method
ELECTRON MICROSCOPY
Resolution
3.8 Å

Loop

Sequence
CAAGC*GCUAGUAA*UGAAUACG
Length
21 nucleotides
Bulged bases
None detected
QA status
Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

7JSW|1|3|C|936
7JSW|1|3|A|937
7JSW|1|3|A|938
7JSW|1|3|G|939
7JSW|1|3|C|940
*
7JSW|1|3|G|1343
7JSW|1|3|C|1344
7JSW|1|3|U|1345
7JSW|1|3|A|1346
7JSW|1|3|G|1347
7JSW|1|3|U|1348
7JSW|1|3|A|1349
7JSW|1|3|A|1350
*
7JSW|1|3|U|1372
7JSW|1|3|G|1373
7JSW|1|3|A|1374
7JSW|1|3|A|1375
7JSW|1|3|U|1376
7JSW|1|3|A|1377
7JSW|1|3|C|1378
7JSW|1|3|G|1379

Current chains

Chain 3
16S ribosomal RNA

Nearby chains

Chain L
30S ribosomal protein S7
Chain N
30S ribosomal protein S9

Coloring options:

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