J3_7K00_014
3D structure
- PDB id
- 7K00 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the Bacterial Ribosome at 2 Angstrom Resolution
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 1.98 Å
Loop
- Sequence
- GC*GCGAAAAG*CC
- Length
- 12 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- J3_7K00_014 not in the Motif Atlas
- Homologous match to J3_5J7L_036
- Geometric discrepancy: 0.0513
- The information below is about J3_5J7L_036
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- J3_60031.2
- Basepair signature
- cWW-cWW-cWW-tWH-tSH-F-F
- Number of instances in this motif group
- 7
Unit IDs
7K00|1|a|G|30
7K00|1|a|C|31
*
7K00|1|a|G|474
7K00|1|a|C|475
7K00|1|a|G|476
7K00|1|a|A|477
7K00|1|a|A|478
7K00|1|a|A|479
7K00|1|a|A|480
7K00|1|a|G|481
*
7K00|1|a|C|509
7K00|1|a|C|510
Current chains
- Chain a
- 23S rRNA
Nearby chains
- Chain p
- 50S ribosomal protein L20
- Chain t
- 50S ribosomal protein L24
Coloring options: