3D structure

PDB id
7K50 (explore in PDB, NAKB, or RNA 3D Hub)
Description
Pre-translocation non-frameshifting(CCA-A) complex (Structure I)
Experimental method
ELECTRON MICROSCOPY
Resolution
3.4 Å

Loop

Sequence
CUAAU*AGGUUAG*CAUAAG
Length
18 nucleotides
Bulged bases
7K50|1|1|U|2334, 7K50|1|1|A|2336
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

7K50|1|1|C|2295
7K50|1|1|U|2296
7K50|1|1|A|2297
7K50|1|1|A|2298
7K50|1|1|U|2299
*
7K50|1|1|A|2317
7K50|1|1|G|2318
7K50|1|1|G|2319
7K50|1|1|U|2320
7K50|1|1|U|2321
7K50|1|1|A|2322
7K50|1|1|G|2323
*
7K50|1|1|C|2332
7K50|1|1|A|2333
7K50|1|1|U|2334
7K50|1|1|A|2335
7K50|1|1|A|2336
7K50|1|1|G|2337

Current chains

Chain 1
23S ribosomal RNA

Nearby chains

Chain 2
5S ribosomal RNA; 5S rRNA
Chain 5
Transfer RNA; tRNA
Chain e
50S ribosomal protein L5
Chain o
50S ribosomal protein L18
Chain w
50S ribosomal protein L27

Coloring options:

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