J3_7K54_005
3D structure
- PDB id
- 7K54 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Mid-translocated +1-frameshifting(CCC-A) complex with EF-G and GDPCP (Structure II-FS)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.2 Å
Loop
- Sequence
- GGA*UUUAAAG*CAC
- Length
- 13 nucleotides
- Bulged bases
- 7K54|1|1|A|1084
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- J3_7K54_005 not in the Motif Atlas
- Homologous match to J3_5J7L_040
- Geometric discrepancy: 0.2191
- The information below is about J3_5J7L_040
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- J3_28621.5
- Basepair signature
- cWW-tSS-cSS-tSH-cWW-cWW-tWW-F-F
- Number of instances in this motif group
- 7
Unit IDs
7K54|1|1|G|1055
7K54|1|1|G|1056
7K54|1|1|A|1057
*
7K54|1|1|U|1081
7K54|1|1|U|1082
7K54|1|1|U|1083
7K54|1|1|A|1084
7K54|1|1|A|1085
7K54|1|1|A|1086
7K54|1|1|G|1087
*
7K54|1|1|C|1102
7K54|1|1|A|1103
7K54|1|1|C|1104
Current chains
- Chain 1
- 23S ribosomal RNA
Nearby chains
- Chain F
- 50S ribosomal protein L36
- Chain h
- 50S ribosomal protein L10
- Chain i
- 50S ribosomal protein L11
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